STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96421.1Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family. (326 aa)    
Predicted Functional Partners:
AFL98298.1
PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase.
  
 
 0.928
AFL98421.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.928
AFL97471.1
PFAM: Phosphorylase superfamily.
    
 0.908
AFL97484.1
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
  
     0.677
AFL97296.1
Hypothetical protein; Manually curated.
  
     0.668
AFL96542.1
Hypothetical protein.
  
     0.658
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
  
 0.628
AFL97635.1
Hypothetical protein.
 
     0.574
AFL97295.1
PFAM: Protein of unknown function (Porph_ging).
  
     0.572
AFL96422.1
Hypothetical protein.
       0.566
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.