STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96527.1PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase). (394 aa)    
Predicted Functional Partners:
AFL98252.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
  
  0.976
AFL96359.1
N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
    
  0.900
AFL96520.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain.
     
  0.900
AFL98127.1
N-acetyl-beta-hexosaminidase; PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain.
    
  0.900
AFL98262.1
N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
    
  0.900
AFL96526.1
PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family.
 
     0.856
AFL96525.1
PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family.
 
     0.800
AFL98101.1
PFAM: BNR/Asp-box repeat.
 
     0.744
AFL96524.1
alpha-L-fucosidase; PFAM: F5/8 type C domain; Alpha-L-fucosidase.
 
     0.699
AFL97492.1
RagB/SusD family protein; PFAM: SusD family.
  
     0.617
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.