STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96710.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
AFL96478.1
Hypothetical protein.
  
     0.769
AFL98464.1
Hypothetical protein.
  
     0.766
AFL97668.1
PFAM: Aminotransferase class IV.
 
     0.761
AFL98213.1
Hypothetical protein.
  
     0.746
AFL97218.1
PFAM: GHMP kinases N terminal domain.
  
     0.731
AFL98047.1
PFAM: Plasmid pRiA4b ORF-3-like protein.
  
     0.705
AFL97611.1
TIGRFAM: gliding motility associated protien GldN.
  
     0.699
AFL96711.1
Putative esterase; PFAM: Phospholipase/Carboxylesterase.
 
     0.685
AFL98426.1
Hypothetical protein.
  
     0.678
AFL97752.1
Hypothetical protein.
  
     0.675
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.