STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96798.1PFAM: Protein of unknown function (DUF2797). (264 aa)    
Predicted Functional Partners:
AFL96797.1
PFAM: Vitamin K-dependent gamma-carboxylase.
       0.651
AFL96796.1
HAD hydrolase, subfamily IA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254.
       0.647
AFL96799.1
Hypothetical protein.
       0.574
AFL96478.1
Hypothetical protein.
  
     0.555
AFL97218.1
PFAM: GHMP kinases N terminal domain.
  
     0.547
AFL96795.1
PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
       0.505
AFL97166.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.498
AFL96710.1
Hypothetical protein.
  
     0.455
AFL98043.1
Mevalonate kinase.
  
     0.425
AFL97668.1
PFAM: Aminotransferase class IV.
  
     0.409
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.