STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96834.1Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (884 aa)    
Predicted Functional Partners:
AFL96794.1
Hypothetical protein.
  
     0.599
AFL96724.1
Hypothetical protein.
  
 
   0.590
AFL96767.1
Outer membrane transport energization protein TonB; (TC 2.C.1.1.1.
  
   0.557
AFL96919.1
Hypothetical protein.
  
   0.511
AFL97149.1
Hypothetical protein.
  
     0.499
AFL97292.1
Hypothetical protein.
  
     0.497
AFL96824.1
PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.481
AFL96833.1
L-asparaginase/GlutRNAGln amidotransferase subunit D; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I.
       0.475
AFL97875.1
Hypothetical protein.
  
     0.450
AFL96717.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
  
    0.435
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.