STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96862.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
AFL96863.1
Hypothetical protein.
       0.773
AFL96864.1
Hypothetical protein.
       0.773
AFL96865.1
Hypothetical protein.
       0.723
AFL96866.1
Hypothetical protein.
       0.723
AFL96867.1
Hypothetical protein.
       0.723
AFL96860.1
Hypothetical protein.
       0.507
AFL96861.1
Hypothetical protein.
       0.507
AFL96859.1
Hypothetical protein.
       0.462
AFL96868.1
Hypothetical protein.
       0.457
AFL96869.1
Transposase, IS30 family; PFAM: Integrase core domain.
       0.457
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.