STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96867.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AFL96865.1
Hypothetical protein.
       0.773
AFL96866.1
Hypothetical protein.
       0.773
AFL96862.1
Hypothetical protein.
       0.723
AFL96863.1
Hypothetical protein.
       0.723
AFL96864.1
Hypothetical protein.
       0.723
AFL96868.1
Hypothetical protein.
       0.485
AFL96869.1
Transposase, IS30 family; PFAM: Integrase core domain.
       0.485
AFL96860.1
Hypothetical protein.
       0.477
AFL96861.1
Hypothetical protein.
       0.477
AFL96859.1
Hypothetical protein.
       0.436
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.