STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96877.1Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain. (219 aa)    
Predicted Functional Partners:
nadK
Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.820
AFL96875.1
Hypothetical protein.
 
     0.731
AFL98049.1
TIGRFAM: gliding motility-associated lipoprotein GldD.
 
     0.708
AFL96610.1
Protein involved in gliding motility GldB.
  
     0.651
AFL97872.1
Long-chain fatty acid transport protein.
 
     0.651
AFL97541.1
Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399.
  
     0.611
AFL97328.1
Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
 
     0.600
AFL98013.1
Hypothetical protein; TIGRFAM: gliding motility-associated C-terminal domain.
  
     0.588
AFL96871.1
PFAM: Outer membrane protein (OmpH-like).
 
     0.586
AFL96878.1
PFAM: Protein of unknown function (DUF419).
       0.568
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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