STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96929.1PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (758 aa)    
Predicted Functional Partners:
AFL96931.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
 0.999
AFL96933.1
PFAM: FixH.
 
 
 0.999
AFL97534.1
Cytochrome c, mono- and diheme variants family; PFAM: Class III cytochrome C family; Cytochrome c.
  
 
 0.999
AFL97537.1
PFAM: Protein of unknown function (DUF3341).
  
 
 0.999
AFL97538.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
  
 
 0.999
AFL96649.1
Hypothetical protein.
  
 
 0.996
AFL96932.1
PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
  
 0.978
AFL97535.1
Fe-S-cluster-containing hydrogenase subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
  
 0.953
AFL96557.1
PFAM: OprF membrane domain.
  
  
 0.945
AFL98052.1
PFAM: OmpA-like transmembrane domain; TIGRFAM: outer membrane autotransporter barrel domain.
  
  
 0.945
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.