STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97041.1Multidrug resistance efflux pump; PFAM: HlyD family secretion protein. (318 aa)    
Predicted Functional Partners:
AFL97042.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
     0.915
AFL97043.1
PFAM: Outer membrane efflux protein.
  
 
 0.880
AFL97040.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.848
AFL97768.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
  
 0.711
AFL98290.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  
 0.676
AFL97767.1
PFAM: Outer membrane efflux protein.
 
 
 0.672
AFL97601.1
PFAM: Outer membrane efflux protein.
  
 
 0.605
AFL97355.1
Hypothetical protein.
  
 
 0.591
AFL97444.1
PFAM: Outer membrane efflux protein.
  
 
 0.591
AFL97044.1
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; Ion transport protein.
 
     0.558
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.