STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97051.1TIGRFAM: rod shape-determining protein MreD. (172 aa)    
Predicted Functional Partners:
AFL97052.1
Cell shape-determining protein; Involved in formation and maintenance of cell shape.
 
    0.850
AFL97050.1
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
       0.820
AFL97053.1
PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.
       0.776
AFL97582.1
Hypothetical protein.
  
     0.754
AFL97049.1
Bacterial cell division membrane protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
  
    0.745
AFL97171.1
Hypothetical protein.
  
     0.703
AFL97047.1
PFAM: GSCFA family.
 
     0.697
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.657
AFL97648.1
Hypothetical protein.
  
     0.612
AFL97223.1
PFAM: Uroporphyrinogen-III synthase HemD.
  
     0.611
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.