STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97124.1Hypothetical protein. (627 aa)    
Predicted Functional Partners:
AFL97123.1
Poly(3-hydroxybutyrate) depolymerase; PFAM: Phospholipase/Carboxylesterase.
 
     0.835
AFL98180.1
PFAM: Fibronectin type III domain.
  
    0.756
AFL98185.1
Hypothetical protein; TIGRFAM: Por secretion system C-terminal sorting domain.
  
    0.726
AFL98374.1
PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
  
     0.672
AFL98179.1
Hypothetical protein.
  
    0.661
AFL97368.1
Hypothetical protein.
  
 
   0.659
AFL96756.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.656
AFL98186.1
PDK repeat-containing protein.
  
  
 0.633
AFL98187.1
Hypothetical protein.
  
     0.599
AFL97086.1
Poly(3-hydroxybutyrate) depolymerase; PFAM: Phospholipase/Carboxylesterase.
  
     0.582
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.