STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97154.1Putative hemolysin; PFAM: Acyltransferase. (602 aa)    
Predicted Functional Partners:
AFL97153.1
PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
       0.820
AFL96478.1
Hypothetical protein.
  
     0.675
AFL96710.1
Hypothetical protein.
  
     0.665
AFL98213.1
Hypothetical protein.
  
     0.654
AFL98464.1
Hypothetical protein.
  
     0.631
AFL97218.1
PFAM: GHMP kinases N terminal domain.
  
     0.515
AFL97872.1
Long-chain fatty acid transport protein.
  
     0.488
AFL97668.1
PFAM: Aminotransferase class IV.
  
     0.472
AFL97152.1
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.449
AFL97752.1
Hypothetical protein.
 
     0.442
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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