STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97177.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
AFL97178.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
     0.939
AFL96315.1
Beta-barrel assembly machine subunit BamD; TIGRFAM: outer membrane assembly lipoprotein YfiO.
   
 
 0.764
AFL96262.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen.
  
 
 0.687
AFL96873.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 0.687
AFL96420.1
Hypothetical protein.
  
 
 0.645
AFL97180.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.473
AFL98089.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.465
AFL97179.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
     
 0.456
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.