STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97296.1Hypothetical protein; Manually curated. (887 aa)    
Predicted Functional Partners:
AFL97295.1
PFAM: Protein of unknown function (Porph_ging).
 
     0.897
AFL96919.1
Hypothetical protein.
  
   0.784
AFL97484.1
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
  
     0.691
AFL96540.1
PFAM: Protein of unknown function (Porph_ging).
 
     0.678
AFL96901.1
Hypothetical protein.
  
   0.676
AFL96421.1
Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family.
  
     0.668
AFL97635.1
Hypothetical protein.
  
     0.623
AFL98142.1
Hypothetical protein.
  
     0.568
AFL98274.1
Hypothetical protein.
  
     0.566
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.565
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.