STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97360.1PFAM: N-acetylmuramoyl-L-alanine amidase. (188 aa)    
Predicted Functional Partners:
AFL97368.1
Hypothetical protein.
 
    0.923
AFL97953.1
PFAM: N-acetylmuramoyl-L-alanine amidase.
     
  0.900
AFL97983.1
PFAM: N-acetylmuramoyl-L-alanine amidase.
     
  0.900
AFL97361.1
Hypothetical protein.
       0.773
AFL97362.1
Hypothetical protein.
       0.773
AFL97363.1
Hypothetical protein.
       0.762
AFL97364.1
Hypothetical protein.
       0.762
AFL97365.1
PFAM: Holin family.
       0.762
AFL97366.1
Hypothetical protein.
       0.751
AFL97367.1
Hypothetical protein.
       0.751
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.