STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97425.1Putative threonine efflux protein; PFAM: LysE type translocator. (219 aa)    
Predicted Functional Partners:
AFL97426.1
TIGRFAM: PEP-CTERM protein sorting domain.
       0.741
AFL96447.1
Hypothetical protein.
  
     0.733
AFL97013.1
Hypothetical protein.
  
     0.728
AFL97217.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
  
     0.721
AFL97424.1
Periplasmic protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF).
       0.701
AFL97670.1
PFAM: Protein of unknown function (DUF493).
  
     0.701
AFL96478.1
Hypothetical protein.
  
     0.682
AFL97330.1
Hypothetical protein.
 
     0.655
AFL96294.1
Hypothetical protein.
  
     0.641
AFL98489.1
Putative protein-translocating porin PorT; (TC 1.B.44.1.1.
  
     0.626
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.