STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97458.1PFAM: Protein of unknown function (DUF2480). (170 aa)    
Predicted Functional Partners:
AFL96294.1
Hypothetical protein.
  
     0.772
AFL96651.1
Hypothetical protein.
  
     0.772
AFL96609.1
TIGRFAM: gliding motility-associated protein GldC.
  
     0.771
AFL97036.1
Aminopeptidase N; PFAM: Peptidase family M1.
  
     0.730
AFL98333.1
PFAM: Acyl-CoA reductase (LuxC).
  
     0.721
AFL97651.1
Hypothetical protein; PFAM: ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.686
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.640
AFL96894.1
PFAM: GH3 auxin-responsive promoter.
  
     0.638
AFL97541.1
Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399.
  
     0.587
AFL96325.1
Putative N-acetylglucosamine kinase; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
  
     0.565
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.