STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97556.1TIGRFAM: exosortase F-associated protein. (146 aa)    
Predicted Functional Partners:
AFL97557.1
TIGRFAM: exosortase family protein XrtF; exosortase/archaeosortase family protein.
 
     0.957
AFL98016.1
Hypothetical protein.
  
     0.760
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.745
AFL97032.1
Hypothetical protein.
  
     0.663
AFL98294.1
Hypothetical protein; TIGRFAM: gliding motility-associated C-terminal domain.
  
     0.651
AFL97558.1
GAF domain-containing protein.
       0.621
AFL97330.1
Hypothetical protein.
  
     0.546
AFL97448.1
Hypothetical protein.
  
     0.536
AFL96759.1
Hypothetical protein.
  
     0.529
AFL97873.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.