STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97563.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.773
AFL97565.1
PFAM: Aminotransferase class I and II.
       0.773
AFL98280.1
Hypothetical protein.
  
     0.622
AFL98095.1
N-dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase.
  
     0.618
AFL97883.1
Hypothetical protein.
  
     0.581
AFL96824.1
PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.549
AFL97566.1
Hypothetical protein.
       0.540
AFL96302.1
DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
  
     0.520
AFL96794.1
Hypothetical protein.
  
     0.508
AFL97567.1
PFAM: Protein of unknown function (DUF1469).
       0.497
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
Server load: medium (74%) [HD]