STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97618.1Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. (528 aa)    
Predicted Functional Partners:
AFL96310.1
PFAM: Peptidase family M49.
  
 
 0.736
AFL96896.1
Protein involved in gliding motility SprE.
    
 0.693
AFL97090.1
Hypothetical protein.
    
 0.693
AFL97108.1
Hypothetical protein.
    
 0.693
AFL97508.1
PFAM: Tetratricopeptide repeat.
    
 0.693
AFL96931.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
 
 0.688
AFL97534.1
Cytochrome c, mono- and diheme variants family; PFAM: Class III cytochrome C family; Cytochrome c.
  
 
 0.631
AFL97537.1
PFAM: Protein of unknown function (DUF3341).
  
 
 0.631
AFL97538.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
  
 
 0.631
AFL96649.1
Hypothetical protein.
  
   0.606
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.