STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97640.1PFAM: Imelysin. (375 aa)    
Predicted Functional Partners:
AFL97642.1
Outer membrane receptor for Fe3+-dicitrate; PFAM: TonB-dependent Receptor Plug Domain.
 
     0.937
AFL97641.1
PFAM: Vitamin K-dependent gamma-carboxylase.
 
     0.935
AFL96697.1
Hypothetical protein.
 
     0.803
AFL96720.1
Hypothetical protein.
 
     0.803
AFL96797.1
PFAM: Vitamin K-dependent gamma-carboxylase.
 
     0.727
AFL97643.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.610
AFL97639.1
Putative amidohydrolase; PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase.
       0.526
AFL97644.1
PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family.
       0.510
AFL97861.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
  
    0.482
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.