STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97679.1Thiol:disulfide interchange protein; PFAM: Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region. (692 aa)    
Predicted Functional Partners:
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.820
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.786
AFL97681.1
Putative permease; PFAM: Domain of unknown function DUF20.
       0.773
AFL97440.1
PFAM: Redoxin.
 
 
 0.753
AFL97480.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin.
 
 
 0.723
AFL97451.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
 
 
 0.701
AFL96693.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: Protein of unknown function (DUF2723).
  
     0.686
AFL97705.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
 
     0.646
AFL98453.1
Hypothetical protein.
  
 
 0.646
AFL98454.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
  
 
 0.646
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.