STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97733.1Putative stress-responsive transcriptional regulator; PFAM: PspC domain. (572 aa)    
Predicted Functional Partners:
AFL97734.1
PFAM: Transcriptional regulator PadR-like family.
     0.947
AFL96443.1
PFAM: Membrane protein of unknown function.
  
    0.806
AFL98240.1
Putative membrane protein; PFAM: DoxX.
  
     0.534
AFL97648.1
Hypothetical protein.
  
     0.518
AFL97667.1
Hypothetical protein.
  
     0.495
AFL97082.1
PFAM: Protein of unknown function (DUF3276).
  
     0.470
AFL97731.1
Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
       0.465
AFL97730.1
PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases.
       0.464
AFL97732.1
PFAM: Acyltransferase.
       0.464
AFL97735.1
PFAM: Bacterial protein of unknown function (DUF937).
       0.456
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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