STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97822.1Putative NADPH-quinone reductase (modulator of drug activity B); PFAM: Flavodoxin-like fold. (201 aa)    
Predicted Functional Partners:
AFL97821.1
Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; (TC 2.A.37.1.
 
 
 0.998
AFL97823.1
PFAM: ZIP Zinc transporter.
       0.773
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.717
cutC
Uncharacterized protein involved in copper resistance; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.651
AFL96996.1
PFAM: Aminotransferase class I and II.
   
    0.568
AFL97565.1
PFAM: Aminotransferase class I and II.
   
    0.568
AFL97825.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases.
       0.441
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.