STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL97976.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region; LysM domain. (636 aa)    
Predicted Functional Partners:
AFL96447.1
Hypothetical protein.
  
     0.690
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
       0.684
AFL98274.1
Hypothetical protein.
  
     0.655
AFL96262.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen.
  
   
 0.652
AFL97013.1
Hypothetical protein.
 
  
 0.648
AFL97439.1
Hypothetical protein.
  
     0.645
AFL97974.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
    0.641
AFL97330.1
Hypothetical protein.
  
     0.600
AFL96795.1
PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
    0.593
AFL96420.1
Hypothetical protein.
  
   
 0.569
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.