STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL98102.1Glycosidase; PFAM: Alpha amylase, catalytic domain. (474 aa)    
Predicted Functional Partners:
AFL97597.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
 
  
 0.815
AFL97825.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases.
 
 
 0.750
AFL97914.1
Glycogen debranching enzyme GlgX; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
  
0.744
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.740
AFL97331.1
PFAM: Starch synthase catalytic domain.
 
  
 0.734
AFL98481.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase.
 
  
 0.728
AFL96248.1
Hypothetical protein.
   
 0.620
AFL96522.1
PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
   
 0.620
AFL97076.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
   
 0.620
AFL97077.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
   
 0.620
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.