STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL98106.1Hypothetical protein. (792 aa)    
Predicted Functional Partners:
AFL97980.1
PFAM: Protein of unknown function (DUF3109).
  
     0.592
AFL98107.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
 
   0.575
AFL96767.1
Outer membrane transport energization protein TonB; (TC 2.C.1.1.1.
  
   0.557
AFL97458.1
PFAM: Protein of unknown function (DUF2480).
  
     0.499
AFL96724.1
Hypothetical protein.
    
   0.447
AFL97328.1
Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.447
AFL98093.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
    0.435
AFL96901.1
Hypothetical protein.
   
   0.434
AFL96919.1
Hypothetical protein.
   
   0.434
AFL98199.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.