STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL98445.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (585 aa)    
Predicted Functional Partners:
AFL97059.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  
 
0.923
AFL98291.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group.
     
0.899
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
     0.846
AFL97040.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
     
0.837
AFL98447.1
TIGRFAM: phosphoesterase, MJ0936 family.
       0.656
AFL97913.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
0.608
AFL98444.1
Hypothetical protein.
       0.596
AFL97613.1
ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter.
  
 
 0.525
AFL97135.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
     
0.511
AFL98430.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family.
  
 0.498
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.