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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB48751.1Glycosyltransferase. (373 aa)    
Predicted Functional Partners:
AGB49982.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.704
AGB49983.1
Acetyltransferase (isoleucine patch superfamily).
 
  
 0.639
AGB50106.1
Dienelactone hydrolase-like enzyme.
   
 
 0.586
AGB49414.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.575
AGB49981.1
Putative dehydrogenase.
 
  
 0.564
AGB49980.1
TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.535
AGB49922.1
Hypothetical protein.
  
 0.529
AGB50493.1
TIGRFAM: nucleotide sugar dehydrogenase.
 
  
 0.529
AGB48750.1
Glycosyltransferase.
 
     0.487
AGB49705.1
Glycosyltransferase.
  
     0.436
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.