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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB48769.1Archaeal flagellin-like protein; TIGRFAM: archaeal flagellin N-terminal-like domain. (188 aa)    
Predicted Functional Partners:
AGB48770.1
Hypothetical protein.
       0.820
AGB49290.1
Flp pilus assembly protein TadC.
 
   
 0.731
AGB48722.1
Putative membrane protein; TIGRFAM: exosortase/archaeosortase family protein; archaeosortase A, PGF-CTERM-specific.
 
     0.728
AGB48715.1
Putative acyltransferase.
  
     0.718
AGB48488.1
Hypothetical protein.
  
     0.707
AGB48550.1
Zn-ribbon containing protein.
  
     0.704
AGB50227.1
Hypothetical protein.
  
     0.703
AGB49755.1
B-block binding subunit of TFIIIC.
  
     0.690
AGB49634.1
Hypothetical protein.
  
     0.688
AGB48300.1
TIGRFAM: signal peptidase I, archaeal type.
  
     0.680
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.