Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB49356.1TIGRFAM: glycine betaine/L-proline transport ATP binding subunit. (375 aa)    
Predicted Functional Partners:
AGB49354.1
ABC-type proline/glycine betaine transport system, permease component.
 
 0.998
AGB49355.1
ABC-type proline/glycine betaine transport system, permease component.
 
 0.998
AGB49357.1
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 0.998
AGB49358.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.481
AGB50472.1
TIGRFAM: molybdate ABC transporter, permease protein.
 
    
 0.444
AGB50221.1
Kef-type K+ transport system, membrane component; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
  
 0.422
AGB49353.1
Putative transcriptional regulator.
       0.411
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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