STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB49467.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
AGB49466.1
Protein of unknown function (DUF2341).
       0.773
AGB49468.1
Hypothetical protein.
       0.757
AGB49465.1
Hypothetical protein.
       0.741
AGB49461.1
Hypothetical protein.
       0.485
AGB49462.1
TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.485
AGB49463.1
Hypothetical protein.
       0.485
AGB49459.1
Hypothetical protein.
       0.425
AGB49460.1
Hypothetical protein.
       0.425
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.