Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB49796.1TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family. (254 aa)    
Predicted Functional Partners:
AGB49797.1
Methanol-cobalamin methyltransferase B subunit.
 
 
 0.998
AGB49024.1
Methanol-cobalamin methyltransferase B subunit.
 
 
 0.980
AGB49025.1
TIGRFAM: methyltransferase, MtaA/CmuA family.
 
 
 0.953
AGB49488.1
TIGRFAM: methyltransferase, MtaA/CmuA family.
 
 
 0.926
AGB49011.1
TIGRFAM: methyltransferase, MtaA/CmuA family.
 
 
 0.922
AGB48325.1
TIGRFAM: trimethylamine:corrinoid methyltransferase; manually curated; Belongs to the trimethylamine methyltransferase family.
   
 0.912
AGB49023.1
TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.
  
  
 
0.901
AGB49795.1
TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.
  
  
 
0.901
AGB48628.1
TIGRFAM: methyltransferase, MtaA/CmuA family.
 
 
 0.730
AGB48305.1
TIGRFAM: methyltransferase, MtaA/CmuA family.
 
 
 0.728
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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