STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB50153.1Glycosyl transferase. (313 aa)    
Predicted Functional Partners:
AGB50154.1
ATPase, type IV secretory pathway VirB11 component like protein.
  
  
 0.535
AGB49508.1
ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.494
AGB49509.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.490
AGB50155.1
Hypothetical protein.
       0.456
AGB49688.1
Glycosyltransferase.
 
  
 0.452
AGB48496.1
Glycosyltransferase.
 
  
 0.443
AGB50074.1
Glycosyltransferase.
 
  
 0.443
AGB48860.1
TIGRFAM: serine O-acetyltransferase.
  
  
 0.440
AGB50493.1
TIGRFAM: nucleotide sugar dehydrogenase.
 
  
 0.433
AGB49705.1
Glycosyltransferase.
 
  
 0.431
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.