Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB50154.1ATPase, type IV secretory pathway VirB11 component like protein. (811 aa)    
Predicted Functional Partners:
AGB50155.1
Hypothetical protein.
 
     0.948
AGB48740.1
Putative archaeal flagellar protein D/E.
  
  
 0.751
AGB49937.1
Flp pilus assembly protein TadC; Manually curated.
 
  
 0.673
AGB48422.1
Putative ATPase.
 
   
 0.663
AGB49936.1
Archaeal flagella assembly protein J.
 
  
 0.629
AGB49290.1
Flp pilus assembly protein TadC.
 
  
 0.627
AGB49366.1
Hypothetical protein.
       0.539
AGB50153.1
Glycosyl transferase.
  
  
 0.531
AGB49240.1
Putative membrane protein.
 
     0.490
AGB48745.1
Archaeal flagella assembly protein J.
  
  
 0.460
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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