close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB50154.1ATPase, type IV secretory pathway VirB11 component like protein. (811 aa)    
Predicted Functional Partners:
AGB50155.1
Hypothetical protein.
 
     0.927
AGB48740.1
Putative archaeal flagellar protein D/E.
  
  
 0.709
AGB49937.1
Flp pilus assembly protein TadC; Manually curated.
 
  
 0.664
AGB48422.1
Putative ATPase.
 
   
 0.663
AGB49936.1
Archaeal flagella assembly protein J.
 
  
 0.619
AGB49290.1
Flp pilus assembly protein TadC.
 
  
 0.616
AGB50153.1
Glycosyl transferase.
  
  
 0.535
AGB49240.1
Putative membrane protein.
 
     0.491
AGB48745.1
Archaeal flagella assembly protein J.
  
  
 0.468
AGB49934.1
TIGRFAM: cell division ATPase MinD, archaeal.
 
  
 0.429
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.