Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB50155.1Hypothetical protein. (645 aa)    
Predicted Functional Partners:
AGB50154.1
ATPase, type IV secretory pathway VirB11 component like protein.
 
     0.948
AGB48422.1
Putative ATPase.
 
     0.694
AGB49340.1
Single-stranded DNA-specific exonuclease.
  
     0.629
AGB49240.1
Putative membrane protein.
  
     0.572
AGB49724.1
Phosphotransferase family protein.
  
     0.568
AGB48952.1
Hypothetical protein.
  
     0.559
AGB48584.1
Putative membrane-associated protein/domain protein.
  
     0.539
AGB49366.1
Hypothetical protein.
       0.539
AGB49871.1
Putative membrane-associated protein/domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
     0.523
AGB49055.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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