Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB50288.1Fe-S oxidoreductase. (327 aa)    
Predicted Functional Partners:
AGB50289.1
Metal-dependent hydrolase, beta-lactamase superfamily II.
 
     0.789
AGB50287.1
Putative DNA-binding protein; Belongs to the UPF0251 family.
 
     0.670
AGB50286.1
ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
   
 0.625
AGB50294.1
P-loop ATPase, MinD superfamily.
 
     0.512
AGB50293.1
P-loop ATPase, MinD superfamily.
 
     0.507
AGB50291.1
Hypothetical protein.
 
     0.501
pcm
protein-L-isoaspartate and D-aspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
 
  
 0.482
AGB50290.1
N-methylhydantoinase A/acetone carboxylase, beta subunit.
       0.456
AGB50240.1
TIGRFAM: histone acetyltransferase, ELP3 family.
  
  
 0.436
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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