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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB50293.1P-loop ATPase, MinD superfamily. (281 aa)    
Predicted Functional Partners:
AGB50291.1
Hypothetical protein.
 
  
 0.938
AGB50292.1
Hypothetical protein.
 
  
 0.894
AGB50294.1
P-loop ATPase, MinD superfamily.
 
   
0.866
AGB50289.1
Metal-dependent hydrolase, beta-lactamase superfamily II.
 
   
 0.786
AGB48626.1
NADH:flavin oxidoreductase.
  
  
 0.708
AGB49544.1
Hypothetical protein.
 
  
 0.652
AGB50286.1
ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 
 0.645
AGB50287.1
Putative DNA-binding protein; Belongs to the UPF0251 family.
 
     0.628
AGB50288.1
Fe-S oxidoreductase.
 
     0.511
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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