Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB50300.1ABC-type metal ion transport system, periplasmic component/surface adhesin. (312 aa)    
Predicted Functional Partners:
AGB50301.1
ATPase component of Mn/Zn ABC-type transporter.
 
 
 0.999
AGB50302.1
ABC-type Mn2+/Zn2+ transport system, permease component.
 
 
 0.999
AGB50299.1
Mn-dependent transcriptional regulator.
  
  
 0.853
AGB48430.1
TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
     
 0.609
rps14
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.593
AGB48910.1
Putative GTPase, G3E family.
  
  
 0.515
AGB49022.1
Putative GTPase, G3E family.
  
  
 0.515
AGB49520.1
Putative GTPase, G3E family.
  
  
 0.515
AGB50054.1
TIGRFAM: PAS domain S-box.
  
  
 0.515
AGB49940.1
Putative membrane-associated Zn-dependent protease.
  
  
 0.478
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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