Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB50333.1Acetyltransferase. (175 aa)    
Predicted Functional Partners:
AGB50334.1
Selenocysteine lyase; TIGRFAM: cysteine desulfurases, SufSfamily; cysteine desulfurase family protein.
     
 0.630
AGB50332.1
Orc1/cdc6 family replication initiation protein; Involved in regulation of DNA replication.
       0.527
AGB50335.1
Hypothetical protein.
       0.525
AGB48992.1
TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.
    
 
 0.480
rpl24
Ribosomal protein L24p/L26e, archaeal/eukaryotic; Located at the polypeptide exit tunnel on the outside of the subunit.
  
   0.417
AGB50089.1
Hypothetical protein.
 
     0.415
Your Current Organism:
Methanomethylovorans hollandica
NCBI taxonomy Id: 867904
Other names: M. hollandica DSM 15978, Methanomethylovorans hollandica DMS1, Methanomethylovorans hollandica DSM 15978, Methanomethylovorans hollandica str. DSM 15978, Methanomethylovorans hollandica strain DSM 15978
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