STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000565325_02223Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000565325_02222
Unannotated protein.
       0.728
GCA_000565325_02221
Unannotated protein.
       0.715
GCA_000565325_02220
Unannotated protein.
       0.695
GCA_000565325_03472
Unannotated protein.
  
     0.540
GCA_000565325_02707
Unannotated protein.
  
     0.530
GCA_000565325_02412
Unannotated protein.
  
     0.485
GCA_000565325_02219
Unannotated protein.
       0.476
GCA_000565325_00820
Unannotated protein.
  
     0.464
GCA_000565325_00748
Unannotated protein.
  
     0.456
GCA_000565325_01092
Unannotated protein.
  
     0.455
Your Current Organism:
Salinivibrio socompensis
NCBI taxonomy Id: 868280
Other names: S. socompensis S10B, Salinivibrio socompensis S10B, Salinivibrio sp. S10B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.