STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000565325_02720Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000565325_02506
Unannotated protein.
    
 0.752
GCA_000565325_00586
Unannotated protein.
    
 0.666
GCA_000565325_02417
Unannotated protein.
 
   
 0.637
GCA_000565325_00460
Unannotated protein.
     
 0.624
GCA_000565325_03006
Unannotated protein.
    
  0.586
GCA_000565325_02373
Unannotated protein.
    
  0.581
GCA_000565325_00583
Unannotated protein.
     
 0.579
GCA_000565325_00964
Unannotated protein.
     
 0.579
GCA_000565325_02257
Unannotated protein.
     
 0.573
GCA_000565325_02258
Unannotated protein.
     
 0.573
Your Current Organism:
Salinivibrio socompensis
NCBI taxonomy Id: 868280
Other names: S. socompensis S10B, Salinivibrio socompensis S10B, Salinivibrio sp. S10B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.