Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF93227.1KEGG: glo:Glov_0131 hypothetical protein. (158 aa)    
Predicted Functional Partners:
AEF93228.1
KEGG: adg:Adeg_1120 hypothetical protein.
 
     0.958
AEF93226.1
KEGG: cpb:Cphamn1_1390 hypothetical protein.
  
  
 0.560
AEF95400.1
KEGG: drm:Dred_3104 hypothetical protein.
  
    0.437
AEF94772.1
KEGG: mta:Moth_1778 molybdopterin binding domain-containing protein; PFAM: Molybdopterin binding; SMART: Molybdopterin binding.
  
    0.418
AEF94768.1
PFAM: 4Fe-4S binding domain; BFD-like [2Fe-2S]-binding domain; KEGG: toc:Toce_0379 BFD domain protein (2Fe-2S)-binding domain protein.
  
     0.402
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.