Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF93549.1KEGG: drm:Dred_2579 hypothetical protein. (124 aa)    
Predicted Functional Partners:
AEF93548.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; Metal-dependent phosphohydrolase, HD subdomain; KEGG: pth:PTH_0310 HD-GYP domain-containing protein; SMART: Diguanylate cyclase, predicted; GAF.
       0.701
AEF93546.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: drm:Dred_1570 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.465
AEF93547.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: drm:Dred_1571 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.465
AEF93545.1
PFAM: ABC transporter substrate binding protein; KEGG: drm:Dred_2840 hypothetical protein.
       0.456
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.445
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.