STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93567.1AzlC family protein; PFAM: Branched-chain amino acid transport, permease; KEGG: drm:Dred_2568 AzlC family protein. (234 aa)    
Predicted Functional Partners:
AEF93566.1
PFAM: Branched-chain amino acid transport, AzlD; KEGG: drm:Dred_2569 branched-chain amino acid transport.
 
  
 0.990
AEF93440.1
PFAM: Cupin 2, conserved barrel; KEGG: drm:Dred_1561 cupin 2 domain-containing protein.
  
  
 0.462
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.