STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93645.1PFAM: GtrA-like protein; KEGG: dae:Dtox_4309 GtrA family protein. (133 aa)    
Predicted Functional Partners:
AEF93437.1
PFAM: Glycosyl transferase, family 39; KEGG: mta:Moth_2358 glycosyl transferase family protein.
 
  
 0.801
AEF93644.1
TIGRFAM: UDP-glucose 4-epimerase; KEGG: dae:Dtox_4306 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.752
AEF93764.1
PFAM: Glycosyl transferase, family 2; KEGG: nde:NIDE2334 hypothetical protein.
  
  
 0.684
AEF93757.1
PFAM: Methyltransferase type 12; Glycosyl transferase, family 2; KEGG: adg:Adeg_1129 glycosyl transferase family 2.
  
  
 0.654
AEF95412.1
KEGG: dae:Dtox_0679 hypothetical protein.
  
     0.527
AEF93412.1
KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
      
 0.519
AEF95437.1
PFAM: O-antigen ligase-related; KEGG: pth:PTH_2583 hypothetical protein.
 
    0.488
AEF93759.1
PFAM: Glycosyl transferase, family 2; Glycosyl transferase, group 1; KEGG: glo:Glov_3374 glycosyl transferase family 2.
     
 0.449
AEF94879.1
CBS domain containing protein; KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; Poly A polymerase, head domain; SMART: Cystathionine beta-synthase, core; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.402
AEF95436.1
TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dae:Dtox_4144 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase.
       0.402
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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