STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93686.1PFAM: Protein of unknown function DUF81; KEGG: drm:Dred_1316 hypothetical protein. (340 aa)    
Predicted Functional Partners:
AEF93682.1
PFAM: Protein of unknown function DUF81; KEGG: drm:Dred_1313 hypothetical protein.
  
     0.731
AEF93685.1
Hypothetical protein.
       0.718
AEF93786.1
KEGG: drm:Dred_1428 hypothetical protein.
 
     0.624
AEF93670.1
PFAM: Protein of unknown function DUF81; KEGG: drm:Dred_0424 hypothetical protein.
  
     0.600
AEF94786.1
PFAM: Protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
  
     0.546
AEF94083.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: drm:Dred_1650 hypothetical protein.
  
     0.533
AEF95213.1
KEGG: drm:Dred_0636 adenylylsulfate reductase, beta subunit; TIGRFAM: Adenylylsulphate reductase, beta subunit; PFAM: 4Fe-4S binding domain.
  
     0.521
AEF95212.1
KEGG: drm:Dred_0637 adenylylsulfate reductase subunit alpha; TIGRFAM: Adenylylsulphate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase.
  
     0.472
AEF93326.1
KEGG: drm:Dred_2929 heat domain-containing protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat.
  
     0.454
AEF95483.1
TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; 4Fe-4S binding domain.
  
     0.419
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.