Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEF93689.1PFAM: Glutaredoxin; KEGG: drm:Dred_1319 hypothetical protein. (85 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.738
AEF93713.1
KEGG: drm:Dred_1342 hypothetical protein.
  
     0.682
AEF94984.1
DSBA oxidoreductase; KEGG: drm:Dred_2656 polyketide biosynthesis dithiol-disulfide isomerase-like protein; manually curated; PFAM: DSBA-like thioredoxin domain.
    
 
 0.679
AEF93582.1
PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_2557 dehydrogenase (flavoproteins).
  
     0.653
AEF94188.1
KEGG: drm:Dred_1735 heat repeat-containing PBS lyase.
  
    0.630
AEF94803.1
PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1245 FAD dependent oxidoreductase.
  
     0.611
AEF93773.1
KEGG: drm:Dred_1407 hypothetical protein.
  
     0.551
AEF93565.1
SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: drm:Dred_2570 SMC domain-containing protein.
 
     0.547
AEF94059.1
Peptidoglycan-binding lysin domain protein; KEGG: drm:Dred_2101 manganese and iron superoxide dismutase; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
   
 0.536
AEF95153.1
KEGG: drm:Dred_0696 hypothetical protein.
  
     0.520
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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