STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93860.1KEGG: drm:Dred_0628 hypothetical protein. (244 aa)    
Predicted Functional Partners:
AEF93859.1
NAD-dependent deacetylase; KEGG: drm:Dred_2032 silent information regulator protein Sir2; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2.
 
     0.605
AEF93861.1
ADP-ribosyl-(dinitrogen reductase) hydrolase; KEGG: dau:Daud_0325 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1.
       0.532
AEF93775.1
KEGG: bts:Btus_0032 hypothetical protein.
  
     0.468
AEF94129.1
PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: drm:Dred_1690 type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.456
AEF94873.1
KEGG: drm:Dred_1137 hypothetical protein.
  
     0.432
AEF93268.1
Electron-transferring-flavoprotein dehydrogenase; KEGG: drm:Dred_1540 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
  
     0.429
AEF93862.1
NADPH dehydrogenase; KEGG: amt:Amet_4335 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal.
       0.419
AEF94118.1
KEGG: drm:Dred_1679 hypothetical protein.
  
     0.404
AEF95049.1
KEGG: drm:Dred_0906 hypothetical protein.
  
     0.404
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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